In most cases email can be configured completely within the KonaKart Admin App in the Configuration>>Email Options section (see image below). Here you can set up your SMTP server host, your SMTP username, SMTP password and whether or not the SMTP server requires authentication:
As with all fields in the Admin App, use the floatover text on each label to find out more about each configuration option.
For more advanced users there is a konakart_mail.properties file in which you can define additional mail properties. (In fact, you can rename this file if you wish and change its location - so long as you define the filename holding these values in the Admin App - see "KonaKart mail properties filename in the image above)). A common example of the use of this konakart_mail.properties file is for setting up access to the Google Mail SMTPS server (this uses a non-standard port (465), requires authentication and uses encryption. An example of the parameters to set to use the Google SMTPS mail gateway is provided in the default konakart_mail.properties file.